PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009758434.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 285aa    MW: 32186.6 Da    PI: 7.99
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009758434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.86.6e-403897362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    e+a+kcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ s
  XP_009758434.1 38 EQAQKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRIS 97
                    7899*****************************************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-283595IPR003851Zinc finger, Dof-type
PfamPF027011.2E-333995IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.2834195IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104379IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MDPSNAHHHH QEMSSQTLES MLVCTKQDQE KKPRPGAEQA QKCPRCDSTN TKFCYYNNYS  60
LTQPRYFCKS CRRYWTKGGT LRNVPVGGGC RKNKRISSKR SQDQSLTNSP NNPISSITPT  120
SYDSSSDLSL AFARLQKQAN GNLGIEENDN MSMMYNNHGN NIASTSFLDT LRGGFLETPN  180
GFQYQNLYYE NNMGQVQNGG MGMNNANEEM RMNYDQEMSG GKIVKQEMCN IAREGENNRI  240
LWGFPWQING EVNNMADFEA SNRGQNWNTG FGGSSWHGLL NSPLM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009758434.10.0PREDICTED: dof zinc finger protein DOF2.1-like isoform X1
RefseqXP_016468849.10.0PREDICTED: dof zinc finger protein DOF2.1-like
TrEMBLA0A068UK671e-112A0A068UK67_COFCA; Uncharacterized protein
STRINGPGSC0003DMT4000652711e-111(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.16e-40TARGET OF MONOPTEROS 6